Next generation sequencing

Post-analysis categorization
- Literature search
Post-survey categorization
- Features validated in most cases
- Features not validated
Simple lists
Preliminary lists

Tool name

SNPSeeker

URL

http://www.genetics.wustl.edu/rmlab/software.htm

Important features

1. Identification of SNPs in pooled genomic samples. 2. It identify data generated from illumina platform.

Citations

Druley TE, Vallania FL, Wegner DJ, Varley KE, Knowles OL, Bonds JA, Robison SW, Doniger SW, Hamvas A, Cole FS, Fay JC, Mitra RD. Quantification of rare allelic variants from pooled genomic DNA. Nat Methods. 2009 Apr;6(4):263-5. Epub 2009 Mar 1. PubMed PMID: 19252504; PubMed Central PMCID: PMC2776647.

Year of publication

2009

Rank by usage frequency

100

Comments

Replaced by SPLINTER.

Function

SNP discovery